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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs659911 chr1:245194443 A/C EFCAB2 chr1:245133007-245290466:+ 0.65 5.51 1.13E-6 Box Plot
ACC rs660767 chr1:245194784 T/G EFCAB2 chr1:245133007-245290466:+ 0.66 5.76 4.53E-7 Box Plot
ACC rs664931 chr1:245198394 G/T EFCAB2 chr1:245133007-245290466:+ 0.69 5.87 3.09E-7 Box Plot
ACC rs664957 chr17:18287839 T/C LOC220594 chr17:18414577-18445234:- 0.64 6.53 2.79E-8 Box Plot
ACC rs66504819 chr6:86901591 A/T SNHG5 chr6:86370668-86388454:- 0.87 5.67 6.39E-7 Box Plot
ACC rs66533903 chr1:235324047 A/C RBM34 chr1:235294498-235324772:- 0.75 6.59 2.26E-8 Box Plot
ACC rs665478 chr1:245198230 G/T EFCAB2 chr1:245133007-245290466:+ 0.73 6.43 3.98E-8 Box Plot
ACC rs6659996 chr1:213047121 A/T LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs66632995 chr7:64509112 GTATCTT/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs6664909 chr1:213043583 A/G LQK1 chr1:213029947-213031480:- 0.84 9.84 1.83E-13 Box Plot
ACC rs66661646 chr6:86238632 TG/T SNHG5 chr6:86370668-86388454:- 0.74 8.43 2.72E-11 Box Plot
ACC rs6666167 chr1:213054375 A/C LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs6666277 chr1:213089379 A/G LQK1 chr1:213029947-213031480:- 0.75 7.79 2.71E-10 Box Plot
ACC rs6666356 chr1:213054503 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot
ACC rs6666368 chr1:213054551 A/G LQK1 chr1:213029947-213031480:- 0.84 9.73 2.63E-13 Box Plot